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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected … (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of …
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Hiroshi Otani
… of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, metabolism and …
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JGI-USCCN Strain Sequencing Opportunity
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Alabama A&M Interns Access An Abundance of Knowledge
… an internship program to bring students to the JGI for research training experience. Enabled by the DOE … Watson and graduate student LaMonika Dent worked with JGI mentors Yi Zhai and John Vogel on researching the … as deliverables. LaMonika Dent : The best part of being a JGI intern has been just the accessibility to an abundance …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… the Genomes OnLine Database (GOLD) administered by the DOE JGI. T.B.K Reddy, Kaushal‘s mentor, described his student’s contributions as reviewing close to 3,800 metagenomes to verify geographic locations and assign latitude … taxonomy name and IDs for nearly 20,000 public/private mtagenome biosamples in GOLD. “Besides these, he curated …
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Exploring Polymorphisms Created by Transposable Elements
… My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable …
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Six join FICUS program in 2026
… The JGI is excited to welcome six to the Facilities Integrating …
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A Model System for Perennial Grasses
… switchgrass ( Panicum virgatum ) is a candidate bioenergy feedstock with a complex genome with multiple copies of its … including researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, report the … (HAL2) and filipes (FIL2) varieties were subjected to a monthlong drought, and then half the plants were watered …
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At the Forefront of Terrestrial Virus Research
… Matthew Sullivan. He shared a few thoughts on his summer at JGI through a program that provides graduate thesis research …
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Better Genome Editing for Bioenergy
… at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica … negative if the gene is actually essential. Through the JGI’s  Community Science Program , the scientists thus set … of sgRNA sequences: six for every gene in the genome. The JGI  DNA Synthesis Science team synthesized these sgRNAs, …
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How Microbes Can Protect Plants in Drier Straits
… New Investigator proposal was recently approved through the JGI Community Science Program, to use microbiome science to …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and …
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