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The trajectory of microbial single-cell sequencing
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ClaMS: A Classifier for Metagenomic Sequences
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science Enabled by the JGI’s … (Spruce and Peatland Responses Under Changing Environments) project, assessing how northern peatland ecosystems respond … under Contract No. DE-AC02-05CH11231. For the sphagnome project, germplasm establishment and maintenance is …
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Methane Makers in Yosemite’s Lakes
… local wildlife (a marmot!) as they’ve sampled the microbial communities living in the mountaintop lakes of the Sierra …
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JGI@25: Solving the Mystery of the Missing Oil
… In honor of the JGI's 25th anniversary in 2022, we have … track and characterize the shifting waves of microbial communities involved in removing different fractions of the … all levels and developing models for cellular properties, communities and ecosystems.” Building off multiple …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… On September 1, JGI held a JGI Engagement: Pro Tips for … multiple ways to can mix and match synthesis, metabolomics, sequencing. The only requirements are that you stay under … to reach that maximum with broader questions and broader project scope? A: Focus on strong science and …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can thrive in changing conditions. A … in the Arctic, and how different types of microbes form communities. As temperatures fluctuate, salt levels change … This was facilitated in part by RNA library preparation and sequencing from the U.S. Department of Energy (DOE) Joint …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… Novel archaeal lineage found in Yellowstone may have been important in early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples collected … comprise 20-50 percent of the iron-oxide microbial mat communities in the 60-80°C temperature range. The discovery …
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Workforce Development & Education Outreach
… through working directly with specific universities, continuing education programs in the Bay Area, and established programs … our aim is to inspire students and established professionals to explore opportunities in STEM by providing hands-on … The JGI and UC Merced have had a long-standing internship partnership that started in the …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. … able to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently evolved to establish symbiotic relationships with plants (mycorrhizae), and particularly how …
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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