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… The User Support Analysis group provides computational analysis for new technology development and JGI user … experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in … also performs ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group also performs …

… the distributed and dynamic metabolite networks of environmental microbes and how they transform their environment. Research Team    …

… By characterizing the structure and function of a methylthio-alkane reductase system, researchers … gaseous organic sulfur compounds in the atmosphere.  Beyond bacteria, this enzymatic machinery has potential as an … innovation ecosystem. “At JGI, we’ve done the synthesis, metagenome mining, all the way from sequencing to functional …

… regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … confirmation bias, because it enables scientists to study how methanogenesis takes place in the context of the … They could just be switched off.” Yet, after extensive study, Hatzenpicher and his team were able to definitively …

… to identify over 27,000 microbial genes. The data from that study is now used across California State University campuses for biotechnology education as part of a course-based undergraduate resource … the chair of the JGI User Executive Committee, on how that study went from the lab to the classroom. …

… array of microorganisms adapted to living in extreme conditions. At these vents, and underwater volcanoes,  … Laboratory, contributed metagenomic sequencing to the study as well as  genome analysis, providing authors a more … Microbial Genomes & Microbiomes (IMG/M) portal. The study,  published in the  Microbiome journal, broadens our …

… about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … there a tool in this platform to search fungal genomes in metagenomes? A: Search in metagenomes is available from … transcripts/proteins with other info such as their corresponding NCBI taxid? A: All download file formats are …

… number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges.  Commissioned for the JGI’s 25th anniversary, the JGI mural …

… Novel archaeal lineage found in Yellowstone may have been important in early Earth conditions. The … mats at Yellowstone offer researchers an analog for studying early Earth conditions. Additionally, … Through the JGI’s Community Science Program , the team used metagenome assemblies, transcriptomes and single amplified …

… stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have … automated aspects of a commonly-used process for studying microbial communities, with results published in … for the production of  clean energy . Summary Arbuscular mycorrhizal fungi, the most widespread type of mycorrhizal …