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Danielle Goudeau
Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric … cell sorting, genome amplification, PCR screening, and 16S sequencing. She also develops novel flow cytometry …
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JGIota: Looking Back at Methane-Making Microbes
… for food and fiber, but raising these animals also produces an atmosphere-warming gas: methane. Those emissions … bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those microbial …
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A One-Stop Shop for Analyzing Algal Genomes
… is one of the largest data repositories of its kind, with an interactive browser that allows algal scientists and … roles in global carbon cycling, are sources of natural products, and have potential as biofuel feedstocks. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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A One-Stop Shop for Analyzing Algal Genomes
… is one of the largest data repositories of its kind, with an interactive browser that allows algal scientists and … roles in global carbon cycling, are sources of natural products, and have potential as biofuel feedstocks. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
Learn more
SIPs with Standards
… are handling specific nutrients, or what they're doing with those nutrients, and even how quickly. But there's a … catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible … make this technique, SIP, more standardized -- more reproducible, more reusable, and more insightful, for the future …
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JGI-USCCN Strain Sequencing Opportunity
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Exploring Polymorphisms Created by Transposable Elements
My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable …
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How Microbes Can Protect Plants in Drier Straits
New Investigator proposal was recently approved through the JGI Community Science Program, to use microbiome science to …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like …
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A Powerful Technique to Study Microbes, Now Easier
National Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots …
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PhycoCosm Tutorial
… analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user …
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The Power of One, Amplified
The Science Researchers demonstrated the value of conducting large-scale single cell genomics by collecting nearly … cells harbored mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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