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Fungus Fuels Tree Growth
Center for Bioenergy Innovation (CBI) at Oak Ridge National Laboratory. To see how the fungus affected poplar growth, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  … Ecosystems (ARBRE) (ANR-11-LABX 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, …
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Complete Genome of Serratia sp. Strain FGI 94, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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Complete Genome of Enterobacteriaceae Bacterium Strain FGI 57, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based … Molecular Sciences and Chemical Engineering.  DOI: 10.1016/b978-0-12-409547-2.14834-6 4. Roth MS, Gallaher SD, …
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Hiroshi Otani
Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in … of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, metabolism and … X., Nocek, B., Li, S.N., Savchenko, A., and Eltis, L.D. (2016) The activity of CouR, a MarR family transcriptional …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Webinar: Introducing the BioSANS capability
Structural Molecular Biology (CSMB) at Oak Ridge National Laboratory.   On March 2, 2021, the Environmental Molecular … (BioSANS) instrument when applying to the FY2022 EMSL-JGI FICUS call for proposals. Presentations from: Scott Lea, … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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Better Genome Editing for Bioenergy
… at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica … negative if the gene is actually essential. Through the JGI’s  Community Science Program , the scientists thus set … of sgRNA sequences: six for every gene in the genome. The JGI  DNA Synthesis Science team synthesized these sgRNAs, …
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New Research Sheds Light on Diversity in the Deep Sea
… conditions — like temperature, pH levels or the availability of certain nutrients — influence the makeup and … a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, contributed metagenomic … the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …
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iPHoP: A Matchmaker for Phages and their Hosts
… new program called iPHoP (pronounced “eye-pop”,  freely available online ). It combines and evaluates multiple … a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, aimed to streamline a process … pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, and the HudsonAlpha Institute for Biotechnology … then tested for heat and pH stress by Oak Ridge National Laboratory. They selected two types of species: ones that …
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Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica
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