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In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … noted that even prior to the sequence being published in  Nature , immediate progress had already been made …

Microbial cells infected by viruses undergo metabolic reprogramming. The … cells as virocells, a change in name first described in 2011 which reflects the metabolic changes they’ve undergone. … As part of efforts to characterize global microbial diversity with an aim to improve predictive ecosystems …

In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute … technical JGI directions for DOE User science. … Complete Publications Genomic Technologies Program Defining the vast … … About the Deputy of Genomic Technologies … Selected Publications … Awards and Honors …

A deep dive into microbial genomics reveals one bacterial species is … with different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific … related 16S rRNA genes, but these genes mask the striking diversity of their genomic capabilities. According to Boeuf, …

A group led by JGI scientists have made strides in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  Nature Microbiology an important addition to the synthetic …

Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat … californiae , and Piromyces finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. … fungi synthesize molecules that are sources of new chemical diversity; the team identified what looked to be three …

Do metabolic pathways from engineered yeasts still work in cell-free environments? … to keep processes running smoothly. As reported August 26, 2021, in Nature Communications , researchers led by Hal Alper at The …

More than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and … in genomics, including JGI, is not representative of the diversity in the population, especially here in California. …

Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and … systems target infectious agents like viruses and plasmids. First,  Ca . Altiarchaeum had CRISPR-Cas systems … Frontiers Group, the National Science Foundation (MCB-1244557 to J.A.D.) and the Lawrence Berkeley National …

Mr. Schmutz’s involvement with the DOE Joint Genome Institute dates back … complex polyploid genome architecture of sugarcane. Nature 628, 804–810. Sreedasyam, A., Plott, C., MdS Hossain, … Award … Plant Science Program … Education … Selected Publications … Awards and Honors …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … genome is cited in roughly 10% of all since-released publications on green algae. “The Chlamy genome launched …

… with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to … version of a specific chemical, where ordinary Carbon-12 atoms are swapped for the heavier, non-radioactive isotope … possibilities, and maximizes returns from the demanding nature of SIP experiments.  Especially as machine learning …