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Mindfully Moving JGI
Twenty years after the JGI united the genomics expertise of three national labs in one long building at Walnut Creek, … 20 miles away in another city and county began more than three years ago. For JGIers, the moving process began in … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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DNA hypomethylation of the host tree impairs interaction with mutualistic ectomycorrhizal fungus
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Effects of Polar Light Cycle on Microbial Food Web
… nutrient cycling that evolved separately from other similar systems, and offers new clues into a unique environment in … water below. Cavicchioli and his team took samples from all three sections of the stratified water and determined that … found that the green sulfur bacteria population spiked to 83%, only to dramatically fall to 1% in early spring and …
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Igor Grigoriev
Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his postdoctoral training at UC Berkeley and … Ye et al (2022) The role of zinc in the adaptive evolution of polar phytoplankton.  Nature Ecol Evol . … … Fungal & Algal Science Program … Education … Selected Publications … Awards and Service …
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Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding
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1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life
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Graduate Students Get Thesis Research Opportunity at the JGI
… at 12 host national laboratories or facilities between 3-12 consecutive months. Their proposed research projects … Structure and Methane Production in California’s Canal System,” she will work with Susannah Tringe, JGI’s User Programs deputy and head of the Microbial Systems group. Tringe’s research group focuses on the roles …
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JGI@25: Studying Sorghum’s Survival Skills
… reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have … her team studied sorghum plants in drought conditions for three years (2016-2018) in the field in Parlier, California …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… or not you planned it, viruses are most likely in your system and in your data, and they’re probably influencing … Group Lead at the JGI.  To understand the microbiome systems underpinning a broad range of environmental … from different ecosystems all over the world, including 3,908 isolate reference DNA viruses and 264,413 …
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Geology and climate influence rhizobiome composition of the phenotypically diverse tropical tree Tabebuia heterophylla
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Horizontal gene transfer and gene dosage drives adaptation to wood colonization in a tree pathogen
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JGI User Executive Committee Expands
… feedback on pangenome tool development. Maurice is a fungal evolutionary ecologist with interests in understanding which … how these changes affect the dynamics and functioning of ecosystems. She leads a recently approved CSP New Investigator … years is eligible for election to the UEC. Members serve three-year terms and can serve no more than two consecutive …
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