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… , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. … the researchers found evolutionary relationships between methanogenesis, methanotrophy, and short-chain … could also help in the search for a last common ancestor between Archaea and Eukarya.   One genome, two metabolic …

… first time in several years, the DOE Joint Genome Institute hosted several UC Merced students this past summer. This … Genetic Elements and CRISPR Spacers in the Conifer Needle Microbiome Carlos Vazquez and mentor Bryce Foster, … & Evolution of Self-Catalytic Introns across Earth’s Microbiomes Sonia Vargas and mentors Tomas Tyml and Frederik …

… stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have … with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope probing (SIP) … particular fungi, researchers identified novel interactions between bacteria and the fungi. The Impact Stable isotope …

… methods to link uncultivated viruses to their host. With these new methods, she hopes to expand our …

… research results in genomics, metagenomics and the human microbiome. The workshop will train participants in … training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia Ivanova and …

… familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational … platform that provides access to the wealth of public microbiome sequence data and enables the user to analyze …

… manifold learning approach to reveal the functional links between gene networks. BMC genomics. 20:12. 2019 Anderson … Selected Publications …

… genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …

… program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates …

… Environmental Research, through contract DE-AC02-05CH11231 between Lawrence Berkeley National Laboratory and the U.S. …

… and applying laboratory ecosystems to help transition microbiome science from largely observational to … precise manipulation and reproducible experimentation of microbiome dynamics. Together, we will explore cutting-edge … ideas, forming collaborations, and charting the future of microbiome science. Organizers The EcoFAB 2025 Conference is …

… recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and … fungi. Overall, better understanding of a recovering soil microbiome provides a window into how to model and track the … process.  Summary Most studies on post-wildfire soil microbiomes have focused on marker gene analyses, which take …