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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become … choose the genome you’re after as the dataset. From the (new and improved JGI Data Portal).  Go to  …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold much of the Earth’s carbon as well as material that can be … to energy, are made up heavily of sphagnum mosses.  New research identifies sex chromosomes in the plant and …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… inviting researchers to submit white papers to the CSP  New Investigator call for proposals.  Tips: Contact us with … and relevance to the DOE’s mission.  Have someone proofread your proposal to make sure the goals, experimental … the 500-gigabase cap and that you don’t request outside of the sample range that’s listed. Q: What are the pros and …
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The JGI announces 2024 awardees for our Community Science Program annual call
… Annual Call. “It’s exciting to see the diverse portfolio of successful CSP proposals this year,” noted Tanja Woyke, … large-scale genomic science projects relevant to the DOE’s Office of Biological and Environmental Research (BER) … this call, as well as smaller-scale calls including our New Investigator and Functional Genomics calls, here on our …
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UC Merced Interns Reflect on Their JGI Summer Projects
… Over the course of eight weeks this past summer, 10 students from UC Merced … on research projects that contribute to the larger mission of the U.S. Department of Energy. Students also worked with … students worked on ranged far and wide — from implementing new data visualization tools, to using natural language …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… as a typical monthly JGI All-Hands Meeting, after a couple of perfunctory items, the agenda went off the rails – according to plan but unbeknownst to Ray and … Ray and it has been especially called on in the move to the new building where that was really critical. It takes a …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … bacteria aren’t usually visible without the assistance of microscope. “It’s 5,000 times bigger than most bacteria. … DNA floats freely within the cytoplasm of their cells. This newly discovered species of bacteria keeps its DNA more …
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Draft Genome Sequence of Methylocapsa palsarum NE2T, an Obligate Methanotroph from Subarctic Soil
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… Newly developed chemiluminescent biosensors shed light on … di-GMP (Guanine Monophosphate) is found in nearly all types of bacteria and interacts with cell signaling networks that … role in regulating microbial cellulose production and biofilm formation, which affects a number of environments, …
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A Collaboration to Improve Plant Genome Annotations Across Species
… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … out to characterize the transcriptome – the complete set of RNA molecules transcribed from all the genes within a … groups joined the project to contribute to the data for six new species. I must mention that some of the members from …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single drop of water could outnumber a small city’s population, the … environmental conditions. Function prediction on the 2,000 new giant virus genomes led the team to uncover a prevalence …
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Axel Visel
… Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his … methods for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of thousands of genetic switches implicated in developmental …
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