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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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Fishing for Novel Cellulose Degraders
… genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed with feathers or wires to mimic an insect or a particular … To validate the predicted cellulases from their captured genomes, the team then used DNA synthesis and cloning, …
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Filling in the Plant Tree of Life
… food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …
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IMG/VR
… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, … and Ben Bowen of the  JGI Metabolomics Program , along with Jenny Mortimer, Director of Plant Systems Biology at … Reference: Erbiligin et al.  MAGI: A Method for Metabolite Annotation and Gene Integration . ACS Chem Biol. 2019 Apr …
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2025 NeLLi Symposium
…   Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … 2025 NeLLi Symposium delves into the most recent expansions of the Tree of Life and latest discoveries toward the evolution of … Symposium will take place at The Marjorie Barrick Museum of Art at the University of Nevada, Las Vegas. The poster …
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Gut Fungi: Unexpected Source of Novel Chemicals
… The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … called natural products . Yet, combing through the genomes of four anaerobic fungal species has revealed, for … in their hunt for anaerobic fungi. By growing extracts without oxygen in ruminant fluid — which smells terrible …
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A chromosome‐scale reference genome of trifoliate orange (Poncirus trifoliata) provides insights into disease resistance, cold tolerance and genome evolution in Citrus
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Preferential retention of genes from one parental genome after polyploidy illustrates the nature and scope of the genomic conflicts induced by hybridization
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … and dominant populations in oxygen-poor environments without oxygen deep below ground. These archaea fix carbon … of countering multiple attempts at virus infections. Their genomes include short DNA sequences that code for CRISPR …
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MGM Workshop at Fisabio Summer School 2025
… Register here The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and … devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. … on Antarctica distinct and unique. In collaboration with the DOE Joint Genome Institute, a DOE Office of Science … (project 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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