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Pumping iron: A multi-omics analysis of two extremophilic algae reveals iron economy management
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms … interactions. This work,  recently published in  The ISME Journal , by contrast, relied on methods that eschew … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Webinar: MycoCosm Tutorial
… for genome sequencing, or only “true fungi”? A(nswer): Our focus is on fungi, algae, plants, and the microbial … MycoCosm and Fungal Program pages ( https://jgi.doe.gov/our-science/science-programs/fungal-genomics/ ). You can also contact us for … working to address some of the most pressing challenges of our time. For more information, please visit  …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… time (1986) 98% of the human genome was thought to be junk DNA, so there was quite a bit of resistance to use resources to sequence it,” Patrinos said. After many more … sectors and it is still seen today as a massive feat in science and collaboration. In closing his presentation, …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome … tools, and the DOE’s emerging AI-enabled capabilities for science.  Dr. Sneddon is an accomplished leader in data, … in bacteria. Proceedings of the National Academy of Sciences of the United States of America 109(3), 805–810 …
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2022 Progress Report
… Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision The … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Lawrence Berkeley National … (Berkeley Lab), is to become the leading integrative genome science user facility enabling researchers to solve the …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … of this bacteria — most likely there is a virus that is already doing what you want in a sense, and can inform on how …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… viridis ). The team of researchers at the Danforth Plant Science Center (Danforth Center), HudsonAlpha and the JGI … Human Genome Project DOE Chromosome publications: The DNA sequence and biology of human chromosome 19 The DNA sequence and comparative analysis of human chromosome 5 …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… of Energy (DOE) Joint Genome Institute, a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced … the summer, three of the graduate student interns一Socheata Hour, Yibing Wang, and Brandon Imstepf一were selected to … and Identification of Mitochondrial Plasmids from DNA Sequence Moitrish Majumdar Mentors: Bikash Shrestha, …
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Katherine Louie
… biological and environmental samples in support of user science.  Capabilities offered by the platform are a result … stable isotope probing (SIP) to assess metabolite turnover, DNA-SIP for helping identify active micro-organisms within … Discovery. 2020.  Reference Module in Chemistry, Molecular Sciences and Chemical Engineering.  DOI: …
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Styling for Safety: PPE, It’s the JGI Way
… address this issue, we launched a PPE Campaign to provide our colleagues with a visual representation of JGI PPE … is important that we follow these requirements and remind our colleagues to do the same. Check out our JGI trendsetters below to see examples of appropriate …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and impactful analysis of microbiome data that has changed our understanding of the microbiome and the microbial sciences field. Roux will be recognized at the 2025 ASM …
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