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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… freshwater ecosystem works. When she set out to analyze 500 metagenomes from this sample set through the Community …
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Fungus Fuels Tree Growth
… elongata enjoys a dual lifestyle; it can thrive in the soil as a saprophyte, living off decaying organic matter, or … of Florida collected forest samples of poplar and soil from Washington and Oregon. The cuttings included … of the  M. elongata strain PM193 added to a diluted soil mixture, publishing  the results in  Molecular …
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Metagenomic and Metatranscriptomic Analyses Revealed Uncultured Bacteroidales Populations as the Dominant Proteolytic Amino Acid Degraders in Anaerobic Digesters
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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The metagenome of the marine anammox bacterium ‘Candidatus Scalindua profunda’ illustrates the versatility of this globally important nitrogen cycle bacterium
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Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days
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What Happens To a Rainforest When You Dial Up Drought?
… store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of …
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Supercharging SIP in the Fungal Hyphosphere
… microorganisms live in complex communities, like within soils or the gut, they are difficult to study individually. … allowing them to process dozens of samples simultaneously. Soil microorganisms play a critical role in sequestering … greenhouse gas emissions, and understanding how to improve soil health can help mitigate the effects of climate change. …
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You Can Move, But You Can’t Hide
… that happen between tiny organisms (microbes) located in soils and water. MGEs like viruses and plasmids drive … currently has more than 700,000 plasmids from genomes, metagenomes and metatranscriptomes. To lower barriers to …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… Portal were instrumental to  a study that looked into how soil viruses , and in particular a chitosanase protein, can contribute to soil health. He also contributed to an update of  the JGI’s … article detailing how forest floors, in particular the soil microbiome, recover post-wildfire . He and  Tringe were …
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SIPs with Standards
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Position-Specific Metabolic Probing and Metagenomics of Microbial Communities Reveal Conserved Central Carbon Metabolic Network Activities at High Temperatures
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