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Identification of a gene encoding the last step of the L-rhamnose catabolic pathway in Aspergillus niger revealed the inducer of the pathway regulator
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Lost in translation: What we have learned from attributes that do not translate from Arabidopsis to other plants
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The fungus that made itself at home
… By comparing genetic information from similar organisms, researchers have gained insights on why the dry rot ( … from Europe, that was sequenced and analyzed by the JGI. The researchers found that S. lacrymans var. lacrymans has become an ecological specialist, adapted to its indoor home, and in doing so has lost …
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Frederik Schulz
… and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the … Nature Biotechnology 39, 499-509. Schulz et al. (2020) Giant virus diversity and host interactions through … metagenomics. Nature. 578 (7795), 432-436 Schulz et al. (2020) Advantages and limits of metagenomic assembly and …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are … draft genome for  S. fallax is already available on the  JGI plant portal Phytozome , and the S. magellanicum genome …
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A Complex Confection Decoded: Sugarcane Reference Genome
… major crop without a reference quality genome and now crop researchers can work toward advancing sugarcane … The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Crops as Tough as World Cup Turf
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Streamlining Regulon Identification in Bacteria
… can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Nature Communications on June 17 , 2022, was conducted by JGI Director Nigel Mouncey and research scientist Hiroshi …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… ability to adapt to stress and rapid environmental changes. Researchers were able to identify specific genes that allow … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … ( The annotated algal genome is available on the JGI’s PhycoCosm data portal.) This research not only sheds …
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Viruses Reprogram Cells into Different Virocells
… or quacks like one, is it still a duck? For a team led by researchers from The Ohio State University and the … U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … project. For this project, RNA sequencing was done by the JGI, and proteomics and metabolomics analysis and microscopy …
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Eelgrass Proves to Be Much Younger Than We Thought
… and Portugal. In order to develop a timeline like this, researchers would normally craft a genetic clock based on … another. This change occurs at a predictable rate, enabling researchers to use the genome assembly to calibrate their genetic clock.  Various researchers around the globe were each working on their own …
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The More the Merrier: Making the Case for Plant Pan-genomes
… traits. Given the importance of polyploidy in plants, researchers have sought to learn the origins, evolution and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … relative of the candidate bioenergy crop switchgrass and a JGI Flagship Plant. All three  Brachypodium  grasses have …
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