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… genomes’ metabolic pathways could lead to the discovery of genes that could be used for multiple biotechnological … moss sex chromosomes continue to evolve so rapidly in gene content and structure. He and JGI Plant Program head … improve crop breeding. For example, Schmutz noted, specific genes of interest could be associated with a plant’s sex. …

… sampling in the Florida Everglades to help train the next generation of scientists. She shares her thoughts about the … analysis.  The class had to sift through over 55 billion genes and 16 trillion DNA bases of data, to figure out what … to look at the predominant taxa and the abundance of genes involved in environmentally significant metabolic …

Populus 8:03 PM Natural Diversity in  Setaria  and a Novel Gene for Shattering   In mid-2019, JGI and KBase will be …

Universität zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling … applicable for non-model species for which fewer ‘marker’ genes are known that are hallmarks of different cell types.” … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …

… in  Nature by an international consortium. With the genetic code of sugarcane, researchers were able to map the location of genes that provide resistance to the brown rust disease that … reference sugarcane  genome , the JGI provides foundational genetic information that crop breeders can use to improve …

… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … A public repository of 52,515 microbial draft genomes generated from environmental samples around the world, … Value Beyond Genome Sequences Much of the data had been generated from environmental samples  sequenced by the JGI …

… 1 billion years of evolution in Kingdom Fungi — from phylogenetic relationships to evolution of genomic mechanisms — … plant genomics community. The project’s aim is to generate high-quality genome assemblies and annotations for … both large and complex. The first publication of a genome generated by the OGG initiative — for Ceratopteris …

… microbiomes that influence algal diversity and gene expression. Sailing from pole to pole on four research … algal communities on filters, they sequenced DNA ‘marker’ gene sequences to identify the microbes. And in order to determine what genes the algae were expressing, the team sequenced their …

… teems beneath your feet. Both bacteria and fungi have genes that can break down plant fibers. But are they both … sequences (transcriptomes) from their soil samples. This gene expression dataset was particularly important for characterizing fungal genes, because, unlike bacteria, they often carry …

Center), HudsonAlpha and the JGI also identified a gene related to seed dispersal in wild populations for the first time. A 2020 Nature Genetics paper describing the genomes of the five major …

… across a spectrum of burned soils. By connecting microbial genes with functions useful for forest recovery, this study … on post-wildfire soil microbiomes have focused on marker gene analyses, which take inventory of which microbes are …