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An Enzyme System to Help Catalyze Bioproduction of Plastic
… avenues for using bacteria to produce ethylene and more.  Microbes excel at recycling the abundant miscellanea of their … industry,” said Justin North, assistant professor of microbiology at Ohio State University and senior author of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Promoting the Power of Viral Metagenomics
… summarizing the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen Nayfach and  Nikos … was written by Call, a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since early … the role of viruses in many areas such as ecology, agriculture, and medicine. In the recently published article, …
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Texas A&M University System, U.S. Department of Agriculture-Agricultural Research Service, Zhejiang A&F …
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Waiting to Respire
… , two research teams joined forces and data sets to describe bacterial genomes for related (“sibling”) lineages … to all five lineages. In the lab of UC Berkeley geomicrobiologist Jill Banfield, a longtime JGI collaborator, postdoctoral fellow Paula Matheus … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… Gardeners and farmers around the country recognize that crop varieties grow best in certain regions. Most plant … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … GLBRC. Additional samples came from U.S. Department of Agriculture stock centers, collaborators, and collections at …
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Triggering Morel Fruiting
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on … from decaying leaves and woods into the atmosphere, while increasing the organic matter and fertility of the soil. … encoding the biochemical processes unveiled by transcriptomics and proteomics. Our key findings contribute to an …
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Expanding Virophage Diversity
… involved in capsid maturation. Recently reported in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the number of known high quality virophage genome … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… a temperate forest filled with Norway spruce trees, and microbial activity teems beneath your feet. Both bacteria and … nitrogen-metabolizing enzymes are abundant, and to which microbes they belong. This study provides further insights … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Trent Northen
… the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using … link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the development …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… angiosperms, suggesting they are evolutionarily conserved across plant lineages. They hypothesized that certain gene … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and environmental interests.  Summary As the planet has changed, so have plants. Curious about their ability to …
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research … and characterize genomic information from uncultivated microbes and viruses. Prior to joining the JGI, she was a … Eloe-Fadrosh is the Metagenome Science Program Head at the JGI. Click to learn more about the program's areas of focus, …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of … August 6th? All URLs with a domain of  https://phytozome.jgi.doe.gov will be forwarded ( where possible ) to their … interactively in v13.  They are: Vvinifera_Genoscope.12 Crubella_v1.0 Mdomestica_v1.0 Fvesca_v1.1 Pvirgatum_v1.1 …
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