Results

JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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The Candidate Phylum Poribacteria by Single-Cell Genomics: New Insights into Phylogeny, Cell-Compartmentation, Eukaryote-Like Repeat Proteins, and Other Genomic Features
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Comparative Analysis of 126 Cyanobacterial Genomes Reveals Evidence of Functional Diversity Among Homologs of the Redox-Regulated CP12 Protein    
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Altered Expression of Two Small Secreted Proteins (ssp4 and ssp6) Affects the Degradation of a Natural Lignocellulosic Substrate by Pleurotus ostreatus
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Silencing of Dicer‐like protein 2a restores the resistance phenotype in the rice mutant, sxi4 (suppressor of Xa21‐mediated immunity 4)
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Approved Proposals
… proposals from previous fiscal years for our Community Science Program (CSP) as well as the Facilities Integrating Collaborations for User Science (FICUS) program.  …
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A Community Resource for Secondary Metabolite Researchers
Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary … specific features or tools. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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SIPs with Standards
… for studying microbial communities. These experiments can show which microbes are handling specific nutrients, or what … catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to …
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Benjamin Cole
Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his … research focus has been on understanding how microbes can colonize plant roots, focusing on genetic components …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … Clum, A. et al. (2021)  DOE JGI metagenome workflow …
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Characterization of the Clostridium thermocellum AdhE, NfnAB, ferredoxin and Pfor proteins for their ability to support high titer ethanol production in Thermoanaerobacterium saccharolyticum
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Uri Neri
Uri Neri is a computational biologist who spends his days wrangling viral genomes … and occasionally remembering to document his code. At JGI, he develops tools for viral discovery and analysis, … to microbial parasites. When not debugging pipelines, he can be found trying to convince others that RNA viruses are …
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