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… The Secondary Metabolism Collaboratory encourages user engagement. … metabolites are useful in a variety of fields including biotechnology, medicine and agriculture. This comprehensive … and secondary metabolites information from isolate and metagenome data.   The SMC ( smc.jgi.doe.gov ) is designed …

… polar oceans give rise to some of the largest food webs on Earth. And at their base are microscopic, photosynthetic … algae. But human-induced climate change , a new study suggests, is displacing these important cold-water … of East Anglia (UEA, UK) and senior author of the study. “Prokaryotes are not capable of producing all the …

… team  announced in  Nature Microbiology an important addition to the synthetic biologist’s toolkit: a technique for  c … select to be engineered. “Piloting access to this emerging technology with JGI users will enable us to assess CRAGE’s impact, including how this application could scale,” says Mouncey. The JGI team has already …

… Trained on environmental data, a new JGI tool more accurately … existing methodologies developed for natural languages to study genomes,” Wang explained.  And since microbial genomes … Lab’s Computing Sciences Area to develop an efficient metagenome assembler capable of assembling many terabases of …

… Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The … sampled all at once from the same environment, called metagenomes. Why? Simon Roux, who led the research team and … the dice. There’s some evidence to support the idea. Study coauthor Stephen Nayfach, a JGI bioinformatics …

… Program was brimming with excitement and determination as they came onsite. From data carpentry to science … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant … able to talk to people that are working at the lab, my coworkers and I also wanted to know what it’s like to work …

… with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale postdoctoral fellowship at NERSC and LBNL’s Computational Research Division. As a postdoc, her research focused on stable and … Informatics Officer provides advice and strategic direction for the overall design and implementation of …

… issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five … article, Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … and experimental approaches with the aim of eventually studying virus-host dynamics in nature. In the last few …

… assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with … inherited from each parent. It also has 700-fold greater contiguity, meaning the genome is reconstructed in much …

… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an … workshops. Of common interest is the method development to study active sites or single cells in their functional … latest advancements in imaging-related technology and instrument-analytical methods.  “The microfluidic devices we …