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Digging into Microbial Ecosystems Deep Underground
… in terms of nutrient cycles and biogeochemical cycles…. Viruses play a pretty important role in the cycling of … these systems.” -Mike Wilkins, Colorado State University GI users and microbiome researchers Mike Wilkins and his … Amundson at Colorado State University have many questions about the microbial communities deep underground, and before …
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JGIota: Sequencing Shiitakes with David Hibbett
… David Hibbett of Clark University fills us in on the kind of decay that makes shiitake mushrooms special. This week, he and 39 collaborators published a paper tracing how these mushrooms have evolved.  …
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Marine Microbe Contains Multitudes
… different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific … surface, to the blue-lit twilight zone, to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. … (Berkeley Lab), through the JGI Community Science Program . The metagenomes were also processed using the …
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Better Crops With a Pointillist Approach to Plant Genomics
… In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which … and more. And eventually, their findings could help us grow better crops, with less impact on our planet. …
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Work With the JGI! Tips for a Winning CSP Proposal
… The JGI’s Community Science Program gives researchers access to all kinds of sequencing, … this episode, hear proposal tips from Tanja Woyke, who runs user programs at the JGI, and project manager Miranda …
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses with double-stranded DNA genomes that co-infect … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Help from Citrus’ Bitter, Hardier Cousin
… disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of trifoliate orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  Citrus genus, which gives us lemons, kumquats, …
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Exploring Phages at JGI
… laboratory. However, through the JGI-UC Merced internship program, I was able to collaborate with extraordinary … that could be available once I complete my PhD program. …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… The practices that support agriculture – such as efficiently using dwindling water resources and restoring and maintaining healthy soils – are at the heart of sustaining food and bioenergy security for a steadily growing … population. Anuvia Plant Nutrients , a small Florida business producing bio-based plant nutrition products that …
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Back to the Future! A Sorghum Story
… were developed specifically to turn their biomass into sustainable biofuel and bioproducts. John Mullet, a biologist at Texas A&M University, tells us how sorghum’s historical — and literal — roots could play …
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2023 Progress Report
… Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, …
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DAS Tool for Genome Reconstruction from Metagenomes
… Science Through the JGI’s Emerging Technologies Opportunity Program (ETOP) , researchers have developed and improved … The work aligns with the ETOP mission of providing JGI users with the most current technology and expertise in … and soil from the Angelo Coast Range Reserve in California. Using DAS Tool on data from soil samples, researchers were …
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