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… A fungus relies on bacteria to regulate key components of its … and a part of the oil-producing Mucoromycotina group, about which little is known. The Cornell team cultivated and experimented with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC …

… Using the IMG/M data portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Research (BER) and is a contribution of the Scientific Focus Area “Phenotypic response of the soil microbiome to …

… have successfully automated aspects of a commonly-used process for studying microbial communities, with … and sequencing steps. Ultimately, researchers found their updated strategy required one-sixth the labor of the manual … HT-SIP is a capability available to request through  the JGI proposal calls . …

… work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, in environments … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … simultaneously, these genomic studies provide information about virus hosts. As a result, the outcomes of these …

… an internship program to bring students to the JGI for research training experience. Enabled by the DOE … fellow interns and scientists alike. Want to learn more about their experience? Watch the short video below. Video … fall for my master’s in plant soil science and my career focus is plant breeding. Ti’Yanna Watson: My mentor is Dr. Yi …

… in terms of nutrient cycles and biogeochemical cycles…. Viruses play a pretty important role in the cycling of … Amundson at Colorado State University have many questions about the microbial communities deep underground, and before the pandemic, they took the JGI on a sampling field trip. One of the questions they’re …

… the genetic codes of plants is often challenging because in many plants chromosomes are present in more than two … Session and Rokhsar, building on work with former JGI postdoc Jarrod Chapman, developed a method to correctly … an early algorithm and developing it in order to talk about the subgenome identity.”  These days, Session is …

… workshop, Volkan Sevim, a computational biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of … that low sequence identity may belie. The technology he’s using is magical; transform any length of amino acid …

… Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an algorithm that a computer could …

… team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered … to address long-standing evolutionary ecological hypotheses about how C4 perennial grasses like switchgrass respond to …

… the location of genes that provide resistance to the brown rust disease that can devastate a crop. The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop breeders can use to improve sugarcane varieties and advance a sustainable …