Results

Conservation of linkage and evolution of developmental function within the Tbx2/3/4/5 subfamily of T-box genes: implications for the origin of vertebrate limbs
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Annotation of the Corymbia terpene synthase gene family shows broad conservation but dynamic evolution of physical clusters relative to Eucalyptus
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Horizontal gene transfer in Histophilus somni and its role in the evolution of pathogenic strain 2336, as determined by comparative genomic analyses
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Cultivation of novel Atribacterota from oil well provides new insight into their diversity, ecology, and evolution in anoxic, carbon-rich environments
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JGI User Executive Committee Expands
Six new members have been elected to the User Executive Committee (UEC) … feedback on pangenome tool development. Maurice is a fungal evolutionary ecologist with interests in understanding which … in developing or improving bioinformatics tools that can help with dataset analysis, as well as how they can be …
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Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement
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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy … oxygen as a byproduct. The abundance of oxygen shaped the evolution of life on Earth, and led to the development of … named for Lynn Margulis, the main proponent of the significance of endosymbiosis in evolution of eukaryotes, and …
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UC Merced Interns Reflect on Their JGI Summer Projects
Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with … — from implementing new data visualization tools, to using natural language processing techniques to categorize genetic … Lei Click the image to watch the video … Intern: Jasper Toscani Field (graduate) Mentor: Brian Bushnell Click the image …
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Data Policy
Data produced and released by the US Department of Energy … this policy) produced through all user projects accepted FY22 and later through the Community Science Program (CSP), … proposal. Third parties (often referred to as “data users”) cannot see this data. Use-Restriction : A period in which …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and … Weight DNA extraction and quality control (from PacBio) 2) Review guidelines detailing quantity and quality … (For shipping packages internationally — including Canada! — please use these instructions.) TSCA Form for …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written … with a recent publication in Molecular Biology and Evolution . “It’s my first publication and it feels so … million different species and evidence of their ancestors can be found in fossil records dating over a billion years …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal … and biofuel production. Learning about the ecology and evolution of  Dothideomycetes could provide more insights … (green). (From Haridas S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, …
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