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JGI@25: Following Fungi that Pry Apart Plant Polymers
… plants can’t run away, they’ve evolved these really tough cell wall materials that keep microbes — and the enzymes … a chemical and biological engineer at the University of California Santa Barbara. So plants don’t break down without a … standards.  A year later, her team used proteomics, genomics and transcriptomics to discover another advantage …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted … this was the first workshop of its kind on SIP metagenomics,” Malmstrom said.  Increasingly, efforts like these … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
Rumen microbes have the ability to break down hardy plant cell walls and therefore hold clues to how humans could do the same on an … in the journal Science. It detailed how they’d used metagenomics — a then-novel approach which allows scientists to …
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Annual Genomics of Energy & Environment Meeting
Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes …
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Cultivating Symbiotic Antarctic Microbes
… of an obligate symbiont—entirely dependent on the other for required nutrients—is genome size. The obligate … growth because they had larger genome sizes and their cells were not observed to associate with host cells. In the  Proceedings of the National Academy of …
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JGI-UC Merced Interns Share Their 2021 Experiences
… the goal of inspiring students to embark on a career in genomics and to help foster a diverse future workforce in … the Mitochondria Internship … Cross Species Integration of Single Cell Transcriptomes … Exploring and Visualizing P. hallii …
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2025 NeLLi Symposium
Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial symbiosis.  This is a … genomic coverage. Experts in cultivation and environmental genomics will work together to develop recommendations for … Olga Zhaxybayeva Dartmouth University … Metagenomic and single-cell sequence data have provided a means to access …
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Improved chromosome-level genome assembly and annotation of the seagrass, Zostera marina (eelgrass)
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Busting the Unbreakable Lignin
… to tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, cumulatively called lignocellulose, …
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Genome sequences of four novel Endozoicomonas strains associated with a tropical octocoral in a long-term aquarium facility.
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Approved Proposals
… pdf of accepted proposals from previous fiscal years for our Community Science Program (CSP) as well as the Facilities Integrating Collaborations for User Science (FICUS) program.  …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… directly measure environmental or biological samples (like cell media or lake water) without doing a metabolite … involved? How long does it take to do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics proposal calls, projects can request up to 50 polar …
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