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Gotta Catch 'Em Gall
… Berkeley and the Joint BioEnergy Institute) are looking for new ways to engineer plants. So they’ve looked into wasps …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … Audio Two special days occur in April: the 50th celebration of Earth Day on April 22, and DNA Day on April 25. Since … at Colorado State University in Fort Collins. He’s part of a JGI-supported project studying the world’s rivers and …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first … 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal waters and sediment with … advanced in my understandings than I would be at this stage without the internship and mentorship that followed. I …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to … Agreement (2003), the JGI recognized the need to engage the community to inform necessary changes to JGI data … to NCBI as well as to the  data portals that the JGI manages, immediately after data processing. The JGI has sought …
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey at Duke University and … a foundational data set that is now available through a new  single-cell data viewer that was collaboratively … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… restoring and maintaining healthy soils – are at the heart of sustaining food and bioenergy security for a steadily … (Berkeley Lab), to help drive discoveries that will render new economic advantages for farmers concerned with improving sustainable soil … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… Newly developed chemiluminescent biosensors shed light on … di-GMP (Guanine Monophosphate) is found in nearly all types of bacteria and interacts with cell signaling networks that … role in regulating microbial cellulose production and biofilm formation, which affects a number of environments, …
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Genome Sequence of Oceanicola sp. Strain MCTG156(1a), Isolated from a Scottish Coastal Phytoplankton Net Sample
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JGI Hosts GPU Hackathon in May
… Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … (ORNL) to make sure our computational workload can leverage future HPC systems – our data and compute challenges … assistance from mentors and a team to port their code to a new architecture. Proposals are due March 1, 2019 for the …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of … installed at the  Integrative Genomics Building , JGI’s newly-built home located in the heart of the Berkeley Lab … stuff accumulated in offices, labs, lockers, and other storage spaces in Walnut Creek and deciding on what was …
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI … His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional … molecular protocols.  Finally, his team utilizes new technologies, e.g. acoustic liquid transfer and …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … as initiators of nitrogen loss in these waters. The top image on the left shows how, from a single bacterial cell … lineages from a variety of environments. In 2017, the first New Lineages of Life (NeLLi) workshop was held, inviting the …
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