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Atif Shahab
… Mr. Shahab has led the development of an integrated platform for tracking JGI's sequencing projects and data warehousing. … Information Management Systems (LIMS), bioinformatics, and genomics data management. He has worked at several renowned …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… hybrid event, with guests joining onsite at the Integrative Genomics Building at Lawrence Berkeley National Laboratory … Nobel Laureate Jennifer Doudna of the University of California, Berkeley and Berkeley Lab, who discussed the … by TE activity. Her lab has leveraged bioinformatics in computational analysis to identify and characterize TEs, …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… plant species have adapted to their local environments; for example, crop and ornamental seeds sold for the upper … sites. “This paper is a combination of really cutting-edge genomics and genetic analysis with large scale data … puzzle with just 50 pieces. The combination of new genetic tools and experimental gardens allow researchers to detect …
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Genome sequences of four novel Endozoicomonas strains associated with a tropical octocoral in a long-term aquarium facility.
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Complete Genome Sequence for Asinibacterium sp. Strain OR53 and Draft Genome Sequence for Asinibacterium sp. Strain OR43, Two Bacteria Tolerant to Uranium
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked … has begun to the June dedication event of the Integrative Genomics Building—the new home of the JGI and KBase in the … newest 5-Year Strategic Plan: Beyond Basepairs — A Vision for Integrative and Collaborative Genome Science , the …
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Exploring the limit of metazoan thermal tolerance via comparative proteomics: thermally induced changes in protein abundance by two hydrothermal vent polychaetes
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… 25-plus years since the JGI’s inception, making it possible for researchers to get a close look at more ecosystems and … all of this information. The JGI aims to create pipelines, tools and other standardized data resources that the global … needs of scientists out in the field, and developing such tools has been a collaborative effort. For example, with …
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Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species
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JGI User Executive Committee Expands
… Laboratory (Berkeley Lab). They are: Ivan Baxter of the Danforth Center, Sundy Maurice of the University of Oslo, Aaron … genetics expertise and experience as a primarily fungal genomics user, he aims to help align JGI policies with … also interested in developing or improving bioinformatics tools that can help with dataset analysis, as well as how …
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The More the Merrier: Making the Case for Plant Pan-genomes
… Laboratory (Berkeley Lab), relied on a model grass system for answers. Their work  recently appeared in  Nature … small genomes, short life cycles and can be easily transformed, traits that make them easy to work with … said John Vogel, head of the Plant Functional Genomics program at the JGI and a senior author on the …
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10 From JGI on the 2019 Highly Cited Researchers List
… Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has … head Nikos Kyrpides , Biology & Biochemistry category Computational Genomics Lead Dan Rokhsar , Molecular Biology & Genetics …
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