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Jane Grimwood Named HudsonAlpha Genomics Chair
… group for the JGI Plant Program . Her collaborations with the JGI began soon after the JGI was established to … was named a Yellowhammer Woman of Impact.     Notable large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… the crop for additional end products. The genetic diversity within this set of plants, each with a fully-sequenced genome, and these gardens allow … cutting-edge genomics and genetic analysis with large scale data collection,” he added. Jeremy Schmutz , head of …
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Leo Baumgart
… handling and bioinformatics pipelines to transition bench-scale methods into production workflows. He developed and scaled the multiDAP-seq assay, a method that enables … Player-Jackson et al. "Supporting FAIR Scientific Workflows with the JGI Analysis Workflow Service (JAWS)." In 2025 IEEE …
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JGI-UC Merced Interns Share Their 2021 Experiences
… interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, … this program’s history, two interns returned to re-engage with their mentors from the previous year and continue … The JGI-UC Merced internship program was founded in 2014 with the goal of inspiring students to embark on a career in …
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IMG/VR
… of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… and recaps of all three keynote talks follow, starting with Bruce Hungate. Other videos of talks from the JGI … address of the 2023 JGI Annual Meeting. As the JGI’s Metagenome Science Program Head, Emiley Eloe-Fadrosh, … and sequence who’s making what, that the context at a microscale is really what counts in determining our ability to …
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Pinning Down a Piece of Photosynthesis
… pin down.  Photosynthesis appears to have a lot in common with a Rube Goldberg machine: surprising dependencies, … on this structure, Grosjean and Blaby-Haas collaborated with a range of researchers across the Albert Einstein … the instrumentation — but the experts we were able to work with on this project to ask questions about structure and …
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Marine Microbe Contains Multitudes
… species is made of four ecologically distinct groups with different lifestyles. The Science The bacterium SAR324 … sequenced community genomes and expressed gene transcripts (metagenomes, metatranscriptomes), as well as the genomes of … Lab), through the JGI Community Science Program . The metagenomes were also processed using the JGI-developed …
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JGI@25: The Little Alga That Could
… challenges. Chlamydomonas is a single-celled alga with a unique place in evolutionary history. Retaining … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … genome is cited in roughly 10% of all since-released publications on green algae. “The Chlamy genome launched …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… some archaeal hosts and their hitchhikers. The Science Within the archaeal domain, there is a group of tiny … the microorganisms had a close relationship. Then, using metagenomes and metatranscriptomes generated by the U.S. … Laboratory (Berkeley Lab), as well as publicly available metagenomes, they analyzed both host and hitchhiker genomes …
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JGI User Executive Committee Expands
… and Kevin Solomon of the University of Delaware. Along with the existing UEC members, their areas of study span the … development. Maurice is a fungal evolutionary ecologist with interests in understanding which processes change … is a staff scientist at Los Alamos National Laboratory. With a background in fungal genetics and evolution, he …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… in 1990 when the U.S. Department of Energy (DOE) partnered with the National Institutes of Health. The DOE works with the National Nuclear Security Administration to … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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