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JGI@25: Building a Better Bean
… capabilities to enable great science that will help solve energy and environmental challenges. While a hill of beans … in soil health through nitrogen-fixation and holds clues for maximizing soybean, the common bean’s close relative, as … use Phaseolus as a test model quite frequently for R&D in plant genomics, because it is an inbred dicot,” Schmutz …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… roles in both the carbon and nitrogen cycles, break down plant mass (think biofuels ), enhance plant health, cause … using techniques that the JGI has pioneered, including single-cell genomics and metagenomics. The GEBA initiative … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Matt Blow
… Together, these teams provide analysis support and R&D for production and user science. He received his Ph.D. from … et al. 2024. scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. … Shulse et al. 2019. Engineered Root Bacteria Release Plant-Available Phosphate from Phytate. Appl Environ …
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Scaling Up Existing Skill Sets
… paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from … in my project was worth it whenever I was able to get a single line of code working and get the desired final …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated … developed, tested and deployed a pipeline to first target cells from communities of uncultivated microbes, and then … world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of microbes that …
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Four Researchers Join JGI User Executive Committee
… Committee of the Joint Genome Institute, a Department of Energy user facility located at Lawrence Berkeley National … State University, Jonathan Eisen of the University of California, Davis, and Michael Köpke of Lanzatech are the latest … in association with both domesticated and wild animal and plant hosts. One main focus of his service to the community …
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Dissolved Inorganic Carbon-Accumulating Complexes from Autotrophic Bacteria from Extreme Environments
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The distribution, diversity and function of predominant Thermoproteales in high‐temperature environments of Yellowstone National Park
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Eelgrass Proves to Be Much Younger Than We Thought
… believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around the globe. Now, scientists have shed … changes in protein sequences, while others analyzed single point mutations across the genome or changes to the …
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Mapping the Earth’s Hidden Fungal Kingdom
… estimated 2–6 million species — dwarfing the diversity of plants. To put this evolutionary timescale in perspective, … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … evolutionary innovations. Some entire lineages have only a single genome representative, while others remain completely …
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Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists
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Improved Draft Genome Sequence of Pseudomonas poae A2-S9, a Strain with Plant Growth-Promoting Activity
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