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Busting the Unbreakable Lignin
… anaerobic fungi could be used to effectively modify lignin without oxygen and make use of it, it would change the … with researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … in the absence of oxygen. These findings offer the first real irrefutable proof that lignin can be deconstructed …
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JGI User Executive Committee Expands
… Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … and Kevin Solomon of the University of Delaware. Along with the existing UEC members, their areas of study span the … to understand the genetic basis of fungal community assembly on dead wood decomposition. She’s also participated …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… grass that can grow year-over-year on marginal soil and with few resources. Despite the low maintenance, it can … crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a close relative and model … than a decade of work; as sequencing technologies advanced, assembly and annotation of the genome sequence improved in …
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JGI@25: The Little Alga That Could
… challenges. Chlamydomonas is a single-celled alga with a unique place in evolutionary history. Retaining … of those shared by both humans and flowering plants). Its genome also contains hundreds of genes uniquely associated … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in … at the University of California, San Diego. As the Sequencing Technology Implementation Lead, he directs a … bacteria, fungi, and plants. His team is also developing single-nuclei sequencing methods to characterize gene …
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Betsy Read
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Biotech Partners Summer Intern Co-Authors NAR Paper
… juniors who participated in internships at the DOE Joint Genome Institute this summer through the Biotech Partners … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the DOE JGI. …
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Genome Sequence of Thermofilum pendens Reveals an Exceptional Loss of Biosynthetic Pathways without Genome Reduction▿ †
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Genome Calligrapher: A Web Tool for Refactoring Bacterial Genome Sequences for de Novo DNA Synthesis
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … we nurture in our workplace and seek to establish with our stakeholders. The guiding principles for … community, and promotes communication and collaboration within the user community. …
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Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing
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Annotated Genome Sequence of the High-Biomass-Producing Yellow-Green Alga Tribonema minus
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