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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 … accepted from 70 full submissions based on 92 letters of intent. Additionally, 40 percent of the proposals were … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université …
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Rex Malmstrom
… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … Ph.D. in Marine Biology/Biochemistry, University of Delaware BA in … quantitative analysis strategy for stable isotope probing metagenomics. mSystems 8:e01280-22. Volland et al. 2022. …
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University … Kunakom S, Otani H, Udwary DW, Doering DT, Mouncey NJ. Cytochromes P450 involved in bacterial …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to advance foundational science, creating … Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year Strategic Plan: Innovating …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in Molecular Biology, University of California, San Diego … I. Greenblum, Abraham Morales-Cruz, Peng Wang, Yu Zhang, Lin Yang, Cindy Chen et al. "Recruitment, rewiring and deep …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … B.S in Biomedical Engineering, Johns Hopkins University; Ph.D. in Bioengineering, … 1. Swift CL, Louie KB, Bowen BP, Olson HM, Purvine SO, Salamov A, et al. Anaerobic gut fungi are an …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes do, how they work, and applying … more than 10 papers, including two Nature Plants publications, in five years, have come out of the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR … advances. Over the last two decades, Stable Isotope Probing (SIP) has opened vast windows into specific activities … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership between JGI and the Molecular … Handling Editor, Journal Experimental Botany, 2022 – present … Scholarship, 2002 & 2004 Graduate Student Award, 59th Lindau Meeting of Nobel Laureates and Students in Lindau, …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the … their base are microscopic, photosynthetic algae. But human-induced climate change , a new study suggests, is displacing these important cold-water communities of algae with …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of … to Antarctic valleys, these organisms have diversified into an estimated 2–6 million species — dwarfing the … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations …
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