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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental … the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of … a population’s genetic makeup and identifying viruses interacting with these populations. Development of this protocol …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of … haloarchaea from different Antarctic lakes. To assess the genomic variation in haloarchaea, they also characterized … hypersaline lakes, researchers focused on understanding the genomic variation in haloarchaea across East Antarctica. The …
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Katherine Louie
… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … techniques, the platform delivers rich metabolite profiles from diverse biological and environmental samples in … and custom software for integrating metabolomics with genomic data (MAGI) for functional annotation and …
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The JGI announces 2024 awardees for our Community Science Program annual call
… Annual Call. “It’s exciting to see the diverse portfolio of successful CSP proposals this year,” noted Tanja Woyke, … outcomes.” The annual CSP call is focused on large-scale genomic science projects relevant to the DOE’s Office of … calls including our New Investigator and Functional Genomics calls, here on our website . See below for the full …
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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published in the …
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A chromosome‐scale reference genome of trifoliate orange (Poncirus trifoliata) provides insights into disease resistance, cold tolerance and genome evolution in Citrus
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Preferential retention of genes from one parental genome after polyploidy illustrates the nature and scope of the genomic conflicts induced by hybridization
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Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure
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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements … techniques take advantage of bioinformatics tools for  extracting snippets of microbial genomes directly from … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to … Kaze was part of the  2018 cohort of the JGI-UC Merced Genomics Internship Program, and is part of  Mark Sistrom’s …
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Genomic adaptations to an endolithic lifestyle in the coral-associated alga Ostreobium
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