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First Monoploid Reference Sequence of Sugarcane
… polyploid sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in … proposal by the DOE’s Joint BioEnergy Institute (JBEI), the JGI was part of an international team led by researchers … The JGI sequenced half of the 4,500 BACs sequenced for this project that were colinear to the gene-rich part of sorghum …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… of this work.  Han is an Assistant Professor at Konkuk University in South Korea as well as a faculty affiliate in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … for computational analysis of the AT enzyme family, the JGI provided DNA synthesis capabilities to enable functional …
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DAS Tool for Genome Reconstruction from Metagenomes
… genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity Program (ETOP) , … samples. The work aligns with the ETOP mission of providing JGI users with the most current technology and expertise in … team led by longtime JGI collaborator Jill Banfield of the University of California, Berkeley and involving JGI …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … their analysis goals. Offering this tool establishes the JGI as a leader in single-cell genomic amplification at a … in microbiome studies, these scientists (now at Stanford University) collaborated with the JGI. Working together, …
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… sphagnum  genomes from plants selected by a team from Duke University, then tested for heat and pH stress by Oak Ridge …
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Complete Genome of Serratia sp. Strain FGI 94, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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Complete Genome of Enterobacteriaceae Bacterium Strain FGI 57, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … manages metabolomics production for community sequencing projects and heads R&D efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based …
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … to culture these microbes in the lab. After joining the JGI, he formed the Microscale Applications group to operate … also carries out custom preparative work for difficult user projects, including those that require fluorescence …
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Uncovering Novel Genomes from Earth’s Microbiomes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the samples we analyzed.” Emiley Eloe-Fadrosh, head of the  JGI Metagenome Program and senior author on the study … hope JGI and other institutions continue to do this kind of projects.” The work also used resources of the  National …
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Making a Lichen Together
… team led by Daniele Armaleo, a biologist at Duke University, investigated Gray’s Cup lichen  (Cladonia grayi) … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and his team at the JGI contributed to annotation of the genomes, available …
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