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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes … Clostridium autoethanogenum. The microbe can utilize carbon oxides, including the greenhouse gas carbon dioxide, … research efforts are accelerating the transition into real-world applications,” says Michael Köpke, the vice …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but this is an important one that … And with Christian, I started getting a little bit more into fungi and learning the differences of all the genetic … get me wrong. But I also was kind of wavering between going into academia and industry. And I always liked being a TA. I …
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Complete genome sequence of Geobacillus thermoglucosidasius C56-YS93, a novel biomass degrader isolated from obsidian hot spring in Yellowstone National Park
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Refining the Process of Identifying Algae Biotechnology Candidates
… to summary above^ as well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these algae in a container with access to sunlight, water and carbon dioxide so they can grow, and then harvest for use as … was supported by the Bioenergy Technology Office (BETO) within the Department of Energy’s Office of Energy Efficiency …
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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write reports, and publish first-author papers, making the data available for future research. Hear from Rekha …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky … viral genomes. This includes (i) classifying viruses into groups that can be compared across studies, (ii) … are similarly poised to contribute transformative insights into the human virome and its implications for …
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Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … that on a catastrophic scale from Baja California north into Oregon and beyond. The disease is known more commonly … al. Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis . Science. 2006 Sep …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science … that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, compare them, and … are important organisms. They play key roles in global carbon cycling, are sources of natural products, and have …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — … soil. These fungi help shape a forest’s ecology. They store carbon and cycle key nutrients like nitrogen and … found in soil samples, and assembled those RNA transcripts into a metatranscriptome. Overall, they found that despite …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program … of the 2023 cohort. Each of them has brought invaluable insights, thoughts, and explorations that has led to … part that was the most rewarding of all the work that went into this program was the feedback from the graduate student …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of … have spread quietly throughout our planet. From the deepest ocean floors to Antarctic valleys, these organisms have diversified into an estimated 2–6 million species — dwarfing the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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