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The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
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JGI Hosts GPU Hackathon in May
… that offers participating teams the opportunity to either jumpstart acceleration or optimize their code on GPUs. While … future HPC systems – our data and compute challenges aren’t getting any smaller and we need to keep pace with changes in …
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Benjamin Cole
Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants interpret different light cues by altering their growth program, and on how plants coordinate their gene expression with light and …
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A Community Resource for Secondary Metabolite Researchers
… and viral BGC sequences. Expansion of the SMC to include fungal, plant, viral, and metagenome data is currently underway. … …
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Boosting Small Molecule Production in Super “Soup”
… cells take three days to make, which is a really exciting jump in the rate of product formation.” This was the first …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… biological contexts. The program fosters intimate, dynamic interactions, offering an unparalleled platform for …
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Natural Variation in the Multidrug Efflux Pump SGE1 Underlies Ionic Liquid Tolerance in Yeast
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Pumping iron: A multi-omics analysis of two extremophilic algae reveals iron economy management
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Model Fern Reveals Insight into DNA Thievery in Ferns
… fundamental aspects of fern biology and, more broadly, land plant evolution. Recent findings in Ceratopteris richardii … ancient gene transfers from bacteria have all armed the plant with an array of defense mechanisms. The Impact There … The insertion of transposable elements — also known as “jumping genes” because they can change position within a …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… how they might interact with their hosts, and how those interactions may in turn impact the host communities and … of large and giant viruses to any known virus lineage. “Getting complete, near complete, or partial giant virus …
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Learning to Look
… percent) metagenomes mined for this study. “We’re simply getting much better at seeing them, which means we can now … itself within a host can lead to beneficial or antagonistic interactions with other co-infecting phages and with the …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… the evolutionary past may hold key insights. The way that plants process nutrients has a rich back story — they rely … work was our focus on all the kingdoms, including animals, plants, bacteria, archaea and fungi. We thought this kind of … from each of six kingdoms: eubacteria, archaea, protist, plant, fungi and animal. This analysis led them to identify …
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