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Defining a Pan-Genome for Antarctic Archaea
… The Science Haloarchaea flourish in hypersaline environments, and researchers are interested in learning how … microbes have learned to adapt from marine to hypersaline conditions by studying the microbial communities in Antarctic … a haloarchaea “pan-genome.” Described as the total pool of genetic material comprised by all members of a species, the …
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Introducing New Members of the JGI User Executive Committee
… User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska of Cornell University, and Jana U’Ren (pronounced “you-wren”) of the University of Arizona! They join nine other JGI users already serving on the …
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Training the Next Generation of Talent
… Office of Science user facility, Keedrian Olmstead was back on campus at the University of California, Merced to start … genome research and apply experimental and computation tools to solve research problems. In Visel’s group, Olmstead … could be considered.” Olmstead’s project focused on the genetic mechanisms of chemotaxis in the Arabidopsis …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … data portal Phytozome. The combination of field data and genetic information has allowed the research team to …
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Webinar: PhycoCosm Tutorial
… about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Why would your Tree ever … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their derivatives … in 2004. The main object of her research was the symbiont community of a gutless oligochaete for which she deciphered function and host-symbiont interplay using metagenomics. Taking on …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, … performed in its User Facilities, is a legally binding contract.   All User researchers must have their … After your proposal is approved, the Contracts Officer will send required paperwork to your …
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Forest Fungi, Seagrass, and a New View of Symbiosis
… Three stories of JGI-supported research, connected to nutrient cycles. Francis Martin and Lucas Auer discuss their work on communities of forest floor fungi. Allison Joy looks into seagrass meadows' carbon sequestration …
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Atif Shahab
… streamlines project management, laboratory information tracking, and enables efficient analysis and reporting of … Mr. Shahab has extensive experience in Laboratory Information Management Systems (LIMS), bioinformatics, and genomics … data management. He has worked at several renowned institutions, developing solutions for large-scale sequencing …
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A new view of the tree of life
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New Tricks with Old Bones
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for … because fungi are very diverse organisms with potential biotechnology applications in a range of fields including … in parallel. While KBase does not currently have all the tools for complete processing and analysis of fungal data, …
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