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… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … diversity. The article adds to the compendium generated as part of Genomic Encyclopedia of Bacteria and … of these bacterial and archaeal genome sequences have been generated using techniques that the JGI has pioneered, …

… often due to, for example, tight regulation of biosynthetic gene clusters (BGCs) in native hosts, the complexity of …

… in areas such as developing pathogen-agnostic detection and prediction strategies for types of as-yet unknown pathogens. …

… project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether … in four forest ecosystems, extracted RNA to understand gene expression, and developed new tools to map that soil … types, Martin and his team combed soil samples to see which genes these three fungal guilds used to grow and metabolize …

… and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions …

An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and …

… peering into the function and activity of phytoplankton genes and looking at how communities of these microalgae … alga Microglena sp. YARC, which also contains expanded genes for proteins requiring zinc. Co-expression analysis as … important for primary metabolism such as photosynthesis and gene regulation.  Mock and his team then linked those …

Research uncovers the genetic foundations that helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  … of how early plants transitioned from water to land. Key gene groups involved in stress tolerance and …

P. psychrophila genes drive resilience when salinity fluctuates. The Science … changes. Researchers were able to identify specific genes that allow the algae to adapt to sudden drops in salt … cell death.  Scientists then extracted RNA to analyze gene expression, to determine which genes are active under …

… that species specific sets of single cells harbored mobile genetic elements that were missed within paired metagenome … of within species recombination, indicating variation in gene flow between the analyzed community members. The Impact … identified from microbial and metagenome sequence data sets generated from a handful of hot springs, including Dewar …

… authors of the  paper published April 20, 2020 in  Nature Genetics include Jane Grimwood and Jeremy Schmutz of JGI’s  … provides breeders with insights on crop improvements at a genetic level, including why having multiple copies of their … disciplines that relate directly and indirectly to genetic diversity, evolution, wild germplasm utilization and …

… of flowering plants multiply. Over time, plants lose many genes after such events, returning their genomes to a diploid state while retaining multiple copies of some genes. This polyploidization process is ongoing and many … by the JGI’s  Community Science Program , the team generated reference genomes for  B. hybridum and  B. stacei …