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Metabolic capacity is maintained despite shifts in microbial diversity in estuary sediments
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MycoCosm Tutorial
… Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for comparative genomics and community annotation. …
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JGI on the 2020 Highly Cited Researchers List
… Congratulations to the 2020 Highly Cited Researchers at the JGI! They are … of a team that  developed CheckV , an automated tool to help researchers assess and improve the quality of … consortium, they  conducted a large-scale comparison of 135 fungal sequenced genomes to understand how plants and fungi …
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A Plant Root Atlas for Tracking Developmental Trajectories
… Cell and provides a community resource that could help researchers track cell development and how they … User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). “This represents the largest … with the JGI’s growing efforts in establishing plant and fungal single-cell and spatial transcriptomic technologies, …
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Tanja Woyke Elected to American Academy of Microbiology
… Congratulations to the JGI’s Tanja Woyke , who has been elected to the … the JGI User community in accessing our resources and help them to push the boundaries of energy and environmental … with Woyke, two JGI users were also elected to the AAM: fungal researcher Jason Stajich of the University of …
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The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat
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JGI@25: The Little Alga That Could
… that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. … of all kinds,” noted Igor Grigoriev, head of the JGI’s Fungal & Algal Program, including work with Olivier Vallon … C. zofingiensis on Phytozome …
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Six join FICUS program in 2026
… The JGI is excited to welcome six to the Facilities Integrating Collaborations for User … user facilities. Focus areas for these projects include biofuels, biomaterials and bioproducts; …
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Len Pennacchio
… has focused on applying state-of-the-art molecular methods to address wide-ranging questions existing in biology. He holds joint appointments as a Deputy Director at the DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC Berkeley. Dr. Pennacchio …
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Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities
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New Insights Into the Influence of Plant and Microbial Diversity on Denitrification Rates in a Salt Marsh
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Transductomics: sequencing-based detection and analysis of transduced DNA in pure cultures and microbial communities
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