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Complete Genome of Serratia sp. Strain FGI 94, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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Complete Genome of Enterobacteriaceae Bacterium Strain FGI 57, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… Texas. Identifying and breeding varieties that have high productivity across a range of environments is becoming … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the crop for additional end products. The genetic diversity within this set of plants, each with a fully-sequenced …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through … to balance its  Data Release and Utilization Policies with the DOE mandate to provide data access widely to the … user projects to publish the primary report of their data without concern of preemption by others. NCBI databases …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … a resource that associates plant’s genetic variants with specific adaptation mechanisms they had identified. For … and later plant lineages that independently expanded. Along with NLRs, the diversified peroxidases are associated with …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal … found inside mitochondria, the energy-producing structures within cells. This is the largest dataset of its kind ever … this set, the same 15 core genes — 14 encoding energy-production proteins plus one ribosomal protein gene — were …
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First Monoploid Reference Sequence of Sugarcane
… species, sequencing programs generally focus on a genotype with two identical sets of chromosomes to produce a … States, Brazil produces a quarter of the world’s ethanol production from sugarcane. Improving sugarcane breeding … polyploid sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s … Zhong Wang and Science Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant … of the fifth summer of its flagship education program with UC Merced. JGI Director Nigel Mouncey and program …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school … Laboratory (Berkeley Lab), embarked on a pilot project with biology students from Boca Raton Community High School … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… On February 17, 2021, JGI and the Environmental Molecular Sciences Laboratory … Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting researchers to … Who can apply for this proposal call? A(nswer): We work with people from all around the world. We work with …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… is found in nearly all types of bacteria and interacts with cell signaling networks that control many basic … plays an important role in regulating microbial cellulose production and biofilm formation, which affects a number of … cyclic di-GMP in bacteria through work enabled by the JGI’s Community Science Program (CSP) . The Impact Cyclic …
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … The course had a defined set of objectives, and started with an image of a spoonful of dirt with the question: Do … significant metabolic pathways related to methane production, nitrogen fixation, and dissimilatory sulfite …
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