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A Mentor’s Perspective on Training the Next Generation
Over the years, hundreds of interns have come to the JGI from all parts of the globe to gain lab experience and contribute to ongoing projects. In one way or another, they’ve all mentioned how …
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Dispatches From JGI Interns
… and graduate students to engage in real, impactful research projects with JGI mentors. In this episode, hear two interns … cohort describe their deep dives into genomics, computational tools, and big data.  …
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JGI announces 2023 CSP Functional Genomics awardees
… year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and …
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An Automated Tool for Assessing Virus Data Quality
Through advances in sequencing technologies and computational approaches, more and more virus sequences are being recovered and identified from environmental samples (metagenomes). However, the quality and … Paulo Research Foundation (FAPESP). A.P.C. received a scholarship #2018/04240-0 from FAPESP. … CheckV on IMG/M Data …
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Supercharging SIP in the Fungal Hyphosphere
… stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, with … a particular fungi, researchers identified novel interactions between bacteria and the fungi. The Impact Stable …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold much of the Earth’s carbon as well as material that can be converted to energy, are … and filtering water. Peat formed there over thousands of years sequesters more carbon than all other vegetation types …
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Evolution of a Fungal Gene Expression Regulator
… analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a … can lead to changes in protein structures and functions, but the DNA bases themselves can also be modified. The best-known example of a modified DNA base is a methylation of the base cytosine at the 5th position on its carbon …
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JGI announces final round of 2022 Functional Genomics awardees
… year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and …
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Yasuo Yoshikuni
… of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, … and applications. This program has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also … crop yield, and developing a platform for building composite materials. Before joining the JGI, Dr. Yoshikuni was …
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JGI@25: Stories from Intern Alumni
… 2022 marks the JGI’s 25th anniversary . Over the next few months, we’ll be revisiting a number of notable achievements … energy and environmental challenges. Over the past 25 years, the JGI has hosted interns from a number of … wet lab experiments, to computational modeling and virtual projects, hear intern alumni Candace Cole, Alessandro …
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The More the Merrier: Making the Case for Plant Pan-genomes
Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the … more than once, and these events took place a million years apart: the individual with a maternal  B. distachyon …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & Education department of Lawrence Berkeley National Laboratory … for the summer term (May through August) and selected projects will receive stipend and travel expenses, both for …
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