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Transcriptomic data sets for Novosphingobium aromaticivorans DSM12444 and a ΔSARO_RS14285 mutant grown in the presence of glucose and either protocatechuic, vanillic, syringic, or 4-coumaric acid
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Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 (= HR1)
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
… repeatable experiments on plants and microbes, Trent Northen’s group at Berkeley Lab created a fabricated … – an EcoFAB. These small plastic growth chambers let researchers around the world compare their work consistently. And EcoFABs also work well in the classroom. This episode, we visit Los Medanos …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written report that is published in a scientific … achievement. To get to this point requires rigorous research, written skill, above all else, determination. …
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … a major transition of biology into data science.  Research in the Kyrpides group focuses on Microbiome Data … The research efforts of the group have concentrated in demonstrating the power of data science in tackling grand …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… Sequencing technology has changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a close look at more ecosystems and … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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2025 NeLLi Symposium
… fees: Regular attendees  (LBNL and external): $400  Industry: $450  Students and postdocs (including LBNL … the University of Nevada, Las Vegas, and the Desert Research Institute, the 2025 NeLLi Symposium delves into the … and the function of candidate lineages in biogeochemical cycles and beyond, as well as microbial symbioses. We aim to …
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Frederik Schulz
… Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, … that may impact microbiome structure and biogeochemical cycles. He provides his expertise to the JGI user community …
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PhycoCosm Tutorial
… Learn more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics … data and comparative analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science …
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Three Join the JGI User Executive Committee
… new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of Oak Ridge … of the University of California, Santa Barbara. They join eight other JGI users already serving on the UEC – go … He’s interested in how microbes influence biogeochemical cycles in soils and sediments and plant-microbial …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … Genomics group also hosts the Viral Genomics group . Research Team    … focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … minority of cultivated bacteria, still persists to date. Research Team    … uncultivated Bacteria and Archaea has steadily been widening since 2005. This gap is also reflected in the strongly …
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