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CheckV can help researchers assess virus sequence fragments and data quality. The Science Through … technologies and computational approaches, more and more virus sequences are being recovered and identified from … the quality and completeness of metagenome-assembled virus sequences vary widely. In a previous effort, an …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on just how morel fruiting is triggered when nutrients are … by the black morel, as well as the gene-expression programs encoding the biochemical processes unveiled by …

… between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download … processes from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal … , and PhycoCosm , serve researchers with unique areas of focus and data and computational needs. Over its 23-year …

… may not seem to amount to much, the common bean (Phaseolus vulgaris) is actually a vital source of protein in many … works on food crops specifically, “[At the JGI] we do use Phaseolus as a test model quite frequently for R&D in … trait. Traditionally beans have had a shelf-life about roughly 6-9 months before their color begins to …

… the genetic codes of plants is often challenging because in many plants chromosomes are present in more than two … his words, the history of the strawberry is complicated because, “when you have comparisons to other closely related … an early algorithm and developing it in order to talk about the subgenome identity.”  These days, Session is …

… from Walnut Creek to the heart of the Berkeley Lab campus. By Friday, October 18, the production sequencing labs in … home located in the heart of the Berkeley Lab main campus. On Monday, November 11, a week after they’d been  moved … asked to “KonMari” their spaces, a decluttering method focused on keeping only items that bring joy (and are necessary …

… first time, a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But what trends govern those virus-host interactions? Do generalist viruses run rampant, …

… heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began soon after … reference sequence of the complex switchgrass genome , using samples from common gardens growing across the … involved researchers at the University of Texas at Austin, HudsonAlpha, and the JGI. Building off this work, …

Miscanthus  sequence offers insights into benefits of polyploidy and … and genomic toolkit for the perennial grass  Miscanthus sinensis has been published. Analysis of the genome … allows  Miscanthus to both inform and benefit from breeding programs of related candidate bioenergy feedstock crops such …

Miscanthus  sequence offers insights into benefits of polyploidy and … and genomic toolkit for the perennial grass Miscanthus sinensis has been published. Analysis of the genome … allows Miscanthus to both inform and benefit from breeding programs of related candidate bioenergy feedstock crops such …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a link in the evolution and transition of … every family of fungi. In the following guest piece, JGI user Ying Chang in the Spatafora lab describes the effort …

Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an algorithm that a computer could … inovirus has established itself through a process called superinfection exclusion, which is another way by which they …