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Gut Fungi: Unexpected Source of Novel Chemicals
… products. The team then confirmed that these expressed genes translated into expected proteins. That work was done …
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Picking Up Threads of Cotton Genomics
… cottons, along with noted key fiber development genes. The results indicate remarkably high overall sequence … analysis of the five cotton genomes identified unique genes related to fiber and seed traits in the domesticated  … G. barbadense and  G. hirsutum species. Unique genes were also identified in the other three wild species. …
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Exploring the Diversity of the American Prairie’s Switchgrass
… traits — height, biomass, hardiness to cold, etc. — to its genes. The undertaking took shovels, trucks — and more than …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… contains about 6% of the human genome . They discovered genes linked to conditions such as cardiovascular disease, … about 2% of the human genome. They were interested in genes involved in repair of DNA damage, and those associated … 3% of the human genome. They wanted to learn about the genes implicated in the development of breast and prostate …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… teems beneath your feet. Both bacteria and fungi have genes that can break down plant fibers. But are they both … was particularly important for characterizing fungal genes, because, unlike bacteria, they often carry … team to have a much more comprehensive picture of microbial genes in the soil and to which type of microbe they …
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The Case for Conservation
… genomes’ metabolic pathways could lead to the discovery of genes that could be used for multiple biotechnological … improve crop breeding. For example, Schmutz noted, specific genes of interest could be associated with a plant’s sex. …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across …
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Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza
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Busting the Unbreakable Lignin
JGI data portals and pipelines helped identify potential genes responsible for lignin deconstruction. (The JGI also … will require further research, including confirming the genes and the enzymes those genes produce. If confirmed, and if they prove capable of …
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Tracking the Origins of Methane-Producing Microbes
… methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or … the genetic machinery to perform hydrogenotrophic methanogenesis and is not a member of the Euryarchaeota. The … found that one of the MAGs contained the complete set of genes needed for hydrogen-dependent and CO2-reducing …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether … types, Martin and his team combed soil samples to see which genes these three fungal guilds used to grow and metabolize … Martin’s team found that both guilds express similar genes for degrading fungal cell walls, the so-called fungal …
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Help from Citrus’ Bitter, Hardier Cousin
Journal.  this study included the discovery of candidate genes that confer resistance to citrus greening disease. …
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