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When “The Blob” Made It Hotter Under the Water
… marine heatwave event may foreshadow climate change impact on marine microbial communities. The Science A team of researchers tracked the impact of a large-scale heatwave … samples collected before, during and after The Blob, researchers developed a preliminary model of how marine …
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JGI Welcomes New UEC Members
… (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their … were nominated, representing a breadth of institutions, research topics and career stages. The election period …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors who … through the Biotech Partners program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… Register here Book your stay at the conference venue This inaugural event will bring together researchers across major ecosystems and disciplines who are … advancing standardized fabricated ecosystems for microbiome research. Contact If you have questions or would like access …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & … Lab) hosted a pitch event promoting fully-supported summer research collaborations through the U.S. Department of … both for faculty members and students who participate. The researchers who pitched potential collaborations were: Simon …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are … can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential of … and unscalable. To test the efficacy of RIViT-seq, researchers recently characterized 12 sigma factors and were …
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How Filamentous Fungi Sense Food
… model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the … present in plant biomass. This is of interest for bioenergy researchers looking to improve the industrial production of …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct … from the warm, well-lit surface, to the blue-lit twilight zone, to the continuous pressure of the dark abyss, 4000 m … lead author Dominique Boeuf and colleagues set sail on research cruises in 2015 and 2016. At Station ALOHA , site …
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Better Genome Editing for Bioenergy
… technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput … To ensure the gene editing tool will make the right cut, researchers created a set of guide RNAs that were effective … study,  published in  Metabolic Engineering , a team of researchers likewise honed their tool before felling their …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… hitchhikers. These organisms are abundant and yet exceptionally small, with mini genomes to match. As a result, they … provides new views of these relationships.  Recently , researchers used population genomics to find that while … more about how archaeal hosts and hitchhikers coexist, researchers studied the host  Ca . Altiarchaeum and its …
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Introducing New Members of the JGI User Executive Committee
… Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on … – go here to view the full roster of members. Each of the researchers had their own reasons for wishing to serve on … in mind. Microbiome ecologist Shade became Director of Research at France’s Centre National de la Recherche …
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Igor Grigoriev
… at the JGI, a Senior Scientist at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and … Biology at University of California, Berkeley. He contributed to the Human Genome Project and led annotation … and PhycoCosm portal. Dr. Grigoriev engaged thousands of researchers in genome projects and organized numerous …
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