Search

… A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey … University and Uwe Ohler at   Humboldt Universität zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly 100,000 single …

… Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of … elements based upon their gene content and their genetic sequences. Roux was first author on a study featuring a new …

… A “bait and hook” single-cell genomic approach to bioprospecting. The Science … pools, followed by whole genome amplification and shotgun sequencing. The team first tested the approach on bacterial … define as “any form of functional enrichment leading to the sequencing of genomes from either individual cells or …

… Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 internships in Walnut Creek. … that I am sure will benefit me for my entire career.” Rhondene Wint, UC Merced JGI Mentors: Igor Grigoriev & Asaf …

… Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 … to as natural products, the proposal includes plans to sequence several thousand Actinobacteria strains and then … is interested in understanding which species of mycorrhizal fungi are important for poplar plant health, in part …

… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science … algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal … inquiry: it shows a full phylogenetic tree of more than 100 sequenced algal genomes — many sequenced by the JGI — so …

… Retracing how the dry rot Serpula lacrymans adapted to a new ecological habitat. The Science By comparing genetic information from similar organisms, researchers … Serpula species, S. himantioides from Europe, that was sequenced and analyzed by the JGI. The researchers found …

… bacteria to regulate key components of its reproductive machinery The Science To better understand how beneficial … from a parasitic interaction with their soil fungus host, Rhizopus microsporus . Researchers found that endobacteria … with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC 52813) as …

… have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel …

… Successful Community Science Program (CSP) Applications Webinar inviting researchers to submit white papers to the CSP  … in their proposal as long as they’re staying under the sequence cap? A(nswer): Proposals that are looking at … multiple ways to can mix and match synthesis, metabolomics, sequencing. The only requirements are that you stay under …

… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a … in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team found that, unlike pathogenic or mycorrhizal fungi (mutualist symbionts that induce structural …

… With a new methodology, scientists are now getting more complete genomic results from single cells. The … usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For years, extracting single cells and then … U.S. Department of Energy Joint Genome Institute (https:// ror.org/04xm1d337), a DOE …