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Maize produces a family of compounds that protects it against … as  Sorghum bicolor — a  candidate bioenergy feedstock and  JGI Flagship Plant — could produce at least 15 zealexins. … Plants that the zealexin pathway has an “hourglass” shape with diverse precursors in, and many different products out, …

… uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … The microbes that play key roles in cycling nutrients such as carbon, nitrogen and sulfur are themselves regulated … to recover the genomes of these viruses and associate them with their microbial hosts. However, assembling viral …

… technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in Nature Communications on June 17 , 2022, was conducted by JGI Director Nigel Mouncey and research scientist …

… payloads directly into diverse microbes. Combining CRAGE with CRISPR provides researchers with a powerful addition to … the functions of the biosynthetic gene clusters that produce them. The Impact Secondary metabolites are microbial … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which … improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently published work on the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 years and …

… develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software … and associated tools, which track samples through the JGI’s Synthetic Biology pipeline as well as provide process …

Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome … part of the flora, fire moss has adapted to conditions such as UV irradiation, heavy metal contamination, and … to evolve so rapidly in gene content and structure. He and JGI Plant Program head Jeremy Schmutz already see how …

… leaving potential targets for crop engineering untouched. Research recently published in  The Proceedings of … National Laboratory (Berkeley Lab). He completed this work with collaborators at the University of Wisconsin-Madison as … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their … relationships, but not all plants and fungi can form such symbiotic partnerships. To learn more about these other … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered … and as a feedstock for biomass-based biofuel production. As seen with many commonly cultivated commercial crops such as …

… between bacteria and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, with results published in the  November 2022 issue … HT-SIP is a capability available to request through  the JGI proposal calls . … Work at Lawrence Livermore National …