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… Uncovering associations between plant roots and fungi that can help or harm plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … consisting of fungal species from natural Arabidopsis populations around Europe. The JGI sequenced and annotated …

… Analysis reveals the microbial community involved in a … PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … of Española, the Santa Clara Pueblo and its nearby rural populations rely heavily on groundwater as their only source …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …

… Describing the largest analysis to date of the modified DNA base 5mC variations in … T or G in a genome sequence can lead to changes in protein structures and functions, but the DNA bases themselves can … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have … Plant Datasets …

… Ancient  Chloroflexota s ditched their flagella and other … place: hot spring-dwelling bacteria from the phylum C hloroflexota . Research shows that flagella were lost in other … had not been known to produce flagella — propeller-like structures that enable organisms to swim around. However, …

… from herbivore poop make surprisingly complex compounds — an energetically expensive feat thought to be too costly for … The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … analyses) to break up the compounds and to puzzle out their structures. Their results indicate that anaerobic fungi …

… to single-cell work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, in … viruses has enabled findings on host range, morphological structures, and infection strategies. More recently, … This work was conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …

… training technologies provide opportunities for students and professors alike The Science In  PLoS Pathogens , a team of … with the JGI and KBase to tap into their existing infrastructures and technologies, enabling these communities to … and developmental support from KBase (The Department of Energy Systems Biology Knowledgebase). Myco-Ed is …

… in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a dizzying array of … features and functions. Making connections between the structures and functions of the genes encoded in the genome … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not … registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … for taxonomic diversity. These studies could pinpoint populations, but they said little about which species were …

… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome … on much more maintainable software and hardware infrastructure. Phytozome v13 has been accessible to users since … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …