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Kjiersten Fagnan
… her research focused on stable and accurate computational methods for reacting subsurface flows, and evolved into … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …
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Nandita Nath
Nandita is involved in developing new methods to improve genome recovery from single cells and to …
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The Power of One, Amplified
A preview of how large-scale single cell genomics complements … approaches including amplicon and metagenomic sequencing. For example, they showed that the composition of the … from agriculture to biotechnology and medicine, the vast majority in, on, and around the planet remain unknown. In …
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Tomas Tyml
Tomas uses traditional cultivation methods along with microscopy and genomics to study … microbial eukaryotes. He hopes to broaden our understanding of the roles these associations play in the evolutionary history of life. …
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Gene Expression: From On-Off Switch to Dial
… approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of gene … expression, when used in addition to traditional methods, can offer scientists a more colorful palette of …
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JGI@25: Building a Better Bean
In honor of the JGI's 25th anniversary in 2022, we have revisited a … great science that will help solve energy and environmental challenges. While a hill of beans may not seem to amount to … 2014 in the journal Nature Genetics . “Common beans are a major societal crop for those with severely limited income,” …
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Kanwar Singh
Kanwar spends part of his time assisting JGI users by processing their single … using our high throughput pipeline. He also explores new methods for creating sequencing libraries and optimizing various …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a … great science that will help solve energy and environmental challenges. Congratulations to Jennifer Doudna of the … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … States. They also provided multiple access points to the information. The team harnessed a community-science program to …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a … great science that will help solve energy and environmental challenges. Oh, the magical world of the cow stomach. Rumen … undergraduate research course for all biotechnology majors at CSU-San Marcos. That course has since expanded …
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Finding the Fermenters
… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …
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