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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a bioremediation effort. The Science In 1999, … team has since identified  Dehalogenimonas etheniformans as one of the strains involved in breaking down PCE at the NRAP … The work (proposal:  10.46936/10.25585/60000717 ) conducted by the U.S. …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. The Science Haloarchaea … Halorubrum lacusprofundi from Deep Lake and Rauer 1 Lake, one of the lakes in the nearby Rauer Islands. Additionally, … This work was supported by the Australian Research Council …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … contiguous sequences (contigs) of proviruses flanked on one or both sides by genes from the host organism. With the …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… Ancient  Chloroflexota s ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have … bacteria have enzymes to synthesize or degrade plant hormones, meaning its land-dwelling counterparts could have the … out at Lawrence Livermore National Laboratory (LLNL) was done under Contract DE-AC52-07NA2734. Funding for this …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … diversity makes it easier to genetically manipulate. One important improvement to the bean spawned from this … P. vulgaris on Phytozome … Plant Datasets …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and … upstream and downstream, which is how the EPA, it’s one of the indices they use for stream health, they look at … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Triggering Morel Fruiting
… A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the Institut … by the morel mycelium and consumed later. The above-mentioned decomposition leads to sustained exportation of organic …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 … more than 10,000 undergraduate students each year. Brian Looney of Duke University is interested in understanding which … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted … Class using CRAGE Technology Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by …
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her … and Betty Moore Foundation as part of the Marine Microbiology Initiative. She conducted her postdoctoral training … Emiley Eloe-Fadrosh is the Metagenome Science Program Head at the JGI. …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His … B.S. in Microbiology, Université Blaise Pascal, France M.S. in … Neri et al., 2023. Expansion of the global RNA virome reveals … and activity is driven by snowmelt and host dynamics in a high-altitude watershed soil ecosystem. Microbiome 11, …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their derivatives during her Ph.D. in Microbiology at the Eberhard Karls University Tübingen (Germany), … Tanja Woyke is the Microbial Science Program Head as well as … to learn more about the program's areas of focus, major initiatives and more.  …
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