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Genome sequence of Ensifer meliloti strain WSM1022; a highly effective microsymbiont of the model legume Medicago truncatula A17
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High‐throughput identification of novel heat tolerance genes via genome‐wide pooled mutant screens in the model green alga Chlamydomonas reinhardtii
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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Analysis of Porphyra Membrane Transporters Demonstrates Gene Transfer among Photosynthetic Eukaryotes and Numerous Sodium-Coupled Transport Systems      
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Contrasting Community Assembly Forces Drive Microbial Structural and Potential Functional Responses to Precipitation in an Incipient Soil System
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after … recovery, this study sheds light on how microbes contribute as a forest recovers after a wildfire. The Impact Healthy … … This work was supported through a USDA NIFA award (2021-67019-34608) to M.J.W. FTICR-MS analyses were performed …
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A Plant Root Atlas for Tracking Developmental Trajectories
… and Uwe Ohler at   Humboldt Universität zu Berlin   has developed an atlas that maps gene expression patterns in … research by then-Biosciences scientist Diane Dickel in 2017. In 2019, plant single-cell methods were officially … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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JGI Workshops at PAG
Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   … present current and ongoing developments at the JGI and KBase toward integrative biology and hear from researchers who are applying genomic …
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A Mentor’s Perspective on Training the Next Generation
Over the years, hundreds of interns have come to the JGI from all parts … lab experience and contribute to ongoing projects. In one way or another, they’ve all mentioned how invaluable their time at the JGI was and how great it was to have an experienced career …
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development … (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes Program … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Understanding the shared genetic toolkit of ancestral and … of the model plant  Marchantia polymorpha. Commonly known as liverwort, this was done to gain insights into gene … Research Council under the European Union’s Horizon 2020 research and innovation program (grant agreement no. …
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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and accurately identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements … resources from the Exascale Computing Project (17-SC-20-SC), a collaborative effort of the U.S. Department of …
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