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In-depth Spatiotemporal Characterization of Planktonic Archaeal and Bacterial Communities in North and South San Francisco Bay
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Global Archaeal Diversity Revealed Through Massive Data Integration: Uncovering Just Tip of Iceberg
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A collection of archaeal 16S rRNA Clone-FISH cultures for probe validation in fluorescence in situ hybridization experiments
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Team Science Reveals Important Protein in Poplar
… Knockout experiments showcase potential for engineering bioenergy crops The Science Scientists at Brookhaven National Laboratory (BNL) led a team that  … This work was supported by the U.S. Department of Energy, Office of … Environmental Research, through contract DE-AC02-05CH11231 between Lawrence Berkeley National Laboratory and the U.S. …
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Distinct Microbial Assemblage Structure and Archaeal Diversity in Sediments of Arctic Thermokarst Lakes Differing in Methane Sources
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in … more than 500 species of fungi. The Impact Interactions between plants and fungi run the gamut from mutually … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … Scientific Program Product Description Deliverables Cycle Time FY25 Q1  (median/75th percentile*) DNA … * Cycle times listed above are based on actual cycle times for projects completed …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The … field experiments and analysis to find relationships between sequence variation and plant stress responses. For example, offspring of a cross between the hallii (HAL2) and filipes (FIL2) varieties were …
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JGI Scientists Pen Genome Watch Articles
… Tanja Woyke and other JGI researchers made their debut writing for the … Program lead, shone a spotlight on  ammonia oxidizing archaea and what we’re learning about their metabolism . And … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for Computational Genomics, and led the … AB in Physics, Princeton University, NJ MS in Theoretical Physics, Cornell University, NY PhD in Physics, Cornell … Publications … 2018 Marthella Foskett Brown Chair, Computational Biology, UC …
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Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains
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In depth metagenomic analysis in contrasting oil wells reveals syntrophic bacterial and archaeal associations for oil biodegradation in petroleum reservoirs
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