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Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network
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Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation
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High-quality draft genome sequence of Pseudomonas aeruginosa san ai, an environmental isolate resistant to heavy metals
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JGI announces 2024 Functional Genomics awardees
… and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions allows …
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DOE Metrics
… related to the return-to-work plan in response to the pandemic.   FY 2019 Number of Unique Users There were 1,933 … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress … 8734 2005 28 33.63 8400 8760 * Reflects actual data due to analysis beyond fiscal year-end close. …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year … the bioeconomy. Functional diversity theme. Reading the genomes of individual organisms or environmental DNA, and …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … mycorrhizal symbiosis in other bioenergy grasses, like sorghum and switchgrass. We’re optimizing systems now, so … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Doubling Down on Known Protein Families
… of scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Research Center  Alexander Fleming. “This was a massive analysis of 1.3 billion proteins with massively parallel … repository of groundbreaking insights, significantly expanding the horizons of potential functions across various …
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Danielle Goudeau
… collaborators. This work combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, and 16S sequencing. She …
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Genetic Analysis of Physcomitrella patens Identifies ABSCISIC ACID NON-RESPONSIVE, a Regulator of ABA Responses Unique to Basal Land Plants and Required for Desiccation Tolerance
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In silico analysis of the expression profile of AA9 Lytic Polysaccharide Monooxygenases (LPMOs) and the CDH Cellobiose Dehydrogenase enzyme in wood-degrader Agaricomycetes. The Pleurotus ostreatus case
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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