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Finding the Fermenters
… data resources, researchers built an interactive and comprehensive database of fermentative prokaryotes. The … including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … records of 8,350 organisms along with 4,355 genomes and 13.6 million genes. The results reveal that fermentative …
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Genome sequence of Bradyrhizobium sp. WSM1253; a microsymbiont of Ornithopus compressus from the Greek Island of Sifnos
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Genome sequence of Ensifer medicae strain WSM1115; an acid-tolerant Medicago-nodulating microsymbiont from Samothraki, Greece
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Natural Prodcast
… research, “Natural Prodcast” serves as an important line of communication to the scientific community. Host Dan Udwary talks to luminaries in the field …
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A Plantiful Future: Xiaohan Yang
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A Complex Confection Decoded: Sugarcane Reference Genome
… was the last major crop without a reference quality genome and now crop researchers can work toward advancing … 80% of sugar production worldwide, but has one of the most complex genetic blueprints. Assembling a genome has been … partly enabled by the JGI’s Community Science Program; in 2018, a monoploid reference sequence of sugarcane …
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A More Intuitive Phytozome Interface
… 12 of Phytozome will be retired, and  version 13 will become the current, and only, version of Phytozome accessible as an interactive website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through open … access in the field of genomics established in  Bermuda (1996-1997) and reinforced by the  Fort Lauderdale Agreement … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies
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JGIota: A Biofuel Breakthrough in Anaerobic Fungi with Michelle O'Malley and Tom Lankiewicz
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the … G3 Genes | Genomes | Genetics , with significant advances compared to the 2014 Eucalyptus grandis reference genome … comparative genomic analyses.   The Impact There are 900 species of eucalyptus. The trees are fast-growing …
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JGI at the AGU Fall Meeting
… (all times in PST unless otherwise noted): December 7   9:15am PT (online) Town Hall on the role of user facilities … context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST … controls of nitrous oxide pulses in rewetted forest soils: An integrated -omic and isotopic approach” 12:39pm …
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