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… research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new … Pascal, France Ph.D. in Bioinformatics, Ecology and Evolutionary Biology, Université Blaise Pascal, France …

… for bioenergy. In this episode, hear from Oak Ridge National Laboratory scientists who have uncovered remarkable genetic secrets that bring us closer to making poplar an economical and sustainable source of energy and materials. …

… (https://data.jgi.doe.gov/) launched last year, it was only accessible through the plant portal  Phytozome . Now … users to more easily access public data sets through a common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a …

… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 years ago, the  Genomes … U.S. Department of Energy operated [DE-AC02-05CH11231]; National Energy Research Scientific Computing Center, which is …

… Genome annotations of two C. citriodora subspecies broaden understanding of … or duplicate arrays, these genes are prone to rapid genetic expansion which partially explains the great variety … production perspective. By using genomic database alignment tools, researchers searched for TPS genes in C. citriodora . …

… Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on the UEC – go here to view the full roster of members. Each of the researchers had their own reasons for wishing to serve on the UEC. For microbial ecologist …

… A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental samples. The Science A team led by researchers at … targeted genomic approach would allow researchers to focus on specific microbes within metagenome samples and associate …

… hitchhikers. These organisms are abundant and yet exceptionally small, with mini genomes to match. As a result, they … to survive. To fill in their nutrient gaps, they must latch onto a larger host — often, a fellow archaeal microbe. … One of these systems, the CRISPR-Cas9 system, is a powerful tool in gene editing, but many other systems exist. …

… The User Support Analysis group provides computational analysis for new technology development and JGI user … experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in … also performs ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group also performs …

… and help them digest their last leafy meal. In their evolutionary history, these fungi branched off early from aerobic … fungal natural products, O’Malley and her team plan to use genetic tools to boost production and isolate the compounds. … California, Santa Barbara and a gift from the Gordon and Betty Moore Foundation to MAO. A portion of this …

… opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer … the door for me in the sense that I learned many different tools in bioinformatics research. Also, it consolidated my … has inspired me to incorporate powerful bioinformatic tools to my research interests during graduate school and …